SmileMS Documentation
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Posters
Swiss MedLab 2008
SmileMS, A New Mass Spectrometry Software for Small Molecules Identification
Authors: Yann Mauron1,4, Roman Mylonas1,4, Alexandre Masselot2, Pierre-Alain Binz1,2, Denis F. Hochstrasser3,4, Frederique Lisacek1,4
1 Proteome Informatics Group, Swiss Institute of Bioinformatics, Geneva, Switzerland, 2 Geneva Bioinformatics (GeneBio) SA, Geneva, Switzerland, 3 Laboratory Medicine Service, University Hospitals of Geneva, Geneva, Switzerland, 4 Geneva University (Geneva, Switzerland)
ASMS 2009
A New Robust Library Search Algorithm for LC-MSMS of Small Molecules and its Spectral Library Sharing Mechanism
Authors: Yann Mauron1; Roman Mylonas1; Alexandre Masselot2; Pierre-Alain Binz1,2; Marc Fathi3; Véronique Viette4; Denis F Hochstrasser3,5; Frederique Lisacek1
1 Swiss Institute of Bioinformatics, Geneva, Switzerland; 2 Geneva Bioinformatics (GeneBio), Geneva, Switzerland; 3 Geneva University Hospitals, Geneva, Switzerland; 4 ADMed Fundation, La Chaux-de-Fonds, Switzerland; 5 Swiss Center for Applied Human Toxicology, Geneva, Switzerland
TIAFT 2009
SmileMS: A Robust Platform and Library Search Algorithm for the Large-Scale Identification of Small Molecules, using LC-MSMS
Authors: Yann Mauron1; Roman Mylonas1; Alexandre Masselot2; Pierre-Alain Binz1,2,3; Hicham Kharbouche4; Marc Augsburger3,4; Frederique Lisacek1
1 Swiss Institute of Bioinformatics, Geneva, Switzerland; 2 Geneva Bioinformatics (GeneBio) SA, Geneva, Switzerland; 3 Swiss Center for Applied Human Toxicology, Geneva, Switzerland; 4 Forensic Chemistry and Toxicology Laboratory, Institute of Legal Medicine, University of Lausanne, Switzerland
IMSC 2009
A New Approach for Acute Clinical Toxicology Based on Ion Trap LC/MSMS Library Search
Authors: Roman Mylonas1, Yann Mauron1, Alexandre Masselot2, Olivier Philippe2, Pierre-Alain Binz1,2, Nicolas Budin2, Marc Fathi3, Véronique Viette3,4, Denis F. Hochstrasser3,5, Frederique Lisacek1, Sebastian Goetz7, Jens Vagts7, Carsten Baessmann7
1 Swiss Institute of Bioinformatics, Geneva, Switzerland; 2 Geneva Bioinformatics (GeneBio) SA, Geneva, Switzerland; 3 Department of Genetics and Laboratory Medicine, Service of Laboratory Medicine, Toxicology Laboratory, Geneva University Hospital, Geneva, Switzerland; 4 ADMed Fondation, La Chaux-de-Fonds, Switzerland; 5 School of Pharmaceutical Sciences, University of Geneva, University of Lausanne, Geneva, Switzerland; 6 Swiss Centre of Applied Human Toxicology CMU, Geneva, Switzerland; 7 Bruker Daltonics, Bremen, Germany
Publications
The publicatoin below describes the X-Rank algorithm (developed by GeneBio) incorporated into SmileMS.
X-Rank: A robust algorithm for small molecule identification using tandem mass spectrometry
Anal Chem. 2009 Sep 15;81(18):7604-10
Roman Mylonas, Yann Mauron, Alexandre Masselot, Pierre-Alain Binz, Nicolas Budin, Marc Fathi, Véronique Viette, Denis F Hochstrasser and Frederique Lisacek
Swiss Institute of Bioinformatics (SIB), Geneva Bioinformatics (GeneBio) SA, Geneva University Hospitals, ADMed Fundation, and Swiss Center for Applied Human Toxicology
DOI: 10.1021/ac900954d
